Uses of Class
org.snpeff.fastq.FastqTrimmer
-
Packages that use FastqTrimmer Package Description org.snpeff.fastq -
-
Uses of FastqTrimmer in org.snpeff.fastq
Subclasses of FastqTrimmer in org.snpeff.fastq Modifier and Type Class Description class
FastqTrimmerAdrian
Trim fastq sequence when: - Median quality drops below a threshold (mean is calculated every 2 bases instead of every base) - Sequence length is at least 'minBases' From Adrian Platts ...Also the sliding window was not every base.class
FastqTrimmerMedian
Trim fastq sequence when median quality drops below a threshold
-