Package org.snpeff.snpEffect
Class PurityChange
- java.lang.Object
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- org.snpeff.snpEffect.PurityChange
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public class PurityChange extends java.lang.Object
Analize purity changes in codons and amino acids- Author:
- pcingola
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Field Summary
Fields Modifier and Type Field Description static int
CODONS_AROUND
static int
CODONS_SIZE
static boolean
debug
static java.lang.String
KEY_SEPARATOR
static int
MIN_COUNT_CODON
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Constructor Summary
Constructors Constructor Description PurityChange(CodonTable codonTable)
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Method Summary
All Methods Static Methods Concrete Methods Modifier and Type Method Description static void
main(java.lang.String[] args)
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Field Detail
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CODONS_AROUND
public static final int CODONS_AROUND
- See Also:
- Constant Field Values
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CODONS_SIZE
public static final int CODONS_SIZE
- See Also:
- Constant Field Values
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MIN_COUNT_CODON
public static final int MIN_COUNT_CODON
- See Also:
- Constant Field Values
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KEY_SEPARATOR
public static final java.lang.String KEY_SEPARATOR
- See Also:
- Constant Field Values
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debug
public static final boolean debug
- See Also:
- Constant Field Values
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Constructor Detail
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PurityChange
public PurityChange(CodonTable codonTable)
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